1. Ruidong Xue#, Qiming Zhang#, Qi Cao#, Ruirui Kong#, Xiao Xiang#, Hengkang Liu, Mei Feng , Fangyanni Wang , Jinghui Cheng, Zhao Li , Qimin Zhan, Mi Deng , Jiye Zhu*, Zemin Zhang*, Ning Zhang*. Liver tumour immune microenvironment subtypes and neutrophil heterogeneity. Nature. 2022 Dec;612(7938):141-147
2. Lin Guo#, Xianfu Yi#, Lu Chen#, Ti Zhang#......Ruidong Xue*, Ning Zhang*. Single cell DNA sequencing reveals punctuated and gradual clonal evolution in hepatocellular carcinoma. Gastroenterology. 2022 Jan;162(1):238-252.
3. Jie Zhu#, Jingxiang Wang#, Xin Wang#, Mingjing Gao#, Bingbing Guo#...... Hong Zhou*, Ning Zhang*, Ruimao Zheng*, Zhengwei Xie.* Prediction of drug efficacy from transcriptional profiles with deep learning.Nature Biotechnology. 2021 Nov;39(11):1444-1452(入选2021年度中国生物信息学十大进展)
4. Chunqing Wang#, Yongmei Li# , Shuai Yan#,…… Ruibing Chen*, Ning Zhang*. Interactome Analysis Reveals That lncRNA HULC Promotes Aerobic Glycolysis Through LDHA and PKM2. Nature Communications. 2020 Jun 22;11(1):3162.
5. Ruidong Xue#, Lu Chen#, Chong Zhang#, Masashi Fujita#, ……Hidewaki Nakagawa*, Mu-Sheng Zeng*, Fan Bai*, Ning Zhang*. Genomic and transcriptomic profiling of combined hepatocellular and intrahepatic cholangiocarcinoma reveals distinct molecular subtypes. Cancer Cell. 2019 Jun 10;35(6):932-947.e8. (入选2020年度Cell Press中国年度论文)
6. Ping Zhou#, Jiaqi Qin#..…Ning Zhang*, Yinsong Wang*. Multifunctional nanoparticles based on a polymeric copper chelator for combination treatment of metastatic breast cancer. Biomaterials. 2019 Mar;195:86-99.
7. Yun Liu…… Yongmei Li*, Ning Zhang*. Demethylation-induced overexpression of Shc3 drives c-Raf-independent activation of MEK/ERK in HCC. Cancer Research. 2018 May 1;78(9):2219-2232.
8. Renwei Jing……Ning Zhang*, Haifang Yin*. Fluorescent peptide highlights micronodules in murine hepatocellular carcinoma models and human in vitro. Hepatology. 2018 Oct;68(4):1391-1411.